Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AL139400.1-201ENST00000366220 510 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 FAM58DP-201ENST00000428076 619 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AL138918.1-201ENST00000568306 659 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AP001059.3-201ENST00000619053 235 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SNX33P1-201ENST00000592116 1762 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 GPAA1P2-202ENST00000606848 1787 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AL512652.2-201ENST00000625156 1716 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHMP1BQ7LBR1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 AC109322.1-201ENST00000524499 1264 ntBASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 ALG1L8P-201ENST00000533887 760 ntBASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 MIR6080-201ENST00000617359 66 ntBASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CHMP1BQ7LBR1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 AC073439.1-201ENST00000624121 1774 ntBASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.76□□□□□ -0.05
CHMP1BQ7LBR1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms