Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.02□□□□□ -0.17
HIST2H3AQ71DI3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 GPS2P2-201ENST00000430745 888 ntBASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 AC010327.4-202ENST00000591484 748 ntBASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 MIR600HG-201ENST00000449175 5984 ntBASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HIST2H3AQ71DI3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 KRT8P37-201ENST00000451609 1420 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AC020658.6-201ENST00000623564 1870 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 DBET-201ENST00000630918 3363 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 KRT18P32-201ENST00000424695 1287 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 BANF1P1-201ENST00000553684 263 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AC004835.2-201ENST00000603762 682 ntBASIC14□□□□□ -0.17
HIST2H3AQ71DI3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST2H3AQ71DI3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms