Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 KRT8P10-201ENST00000450021 1447 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AC007967.3-201ENST00000434308 558 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 RASA4DP-201ENST00000460726 1199 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AC068472.1-201ENST00000474589 881 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GPAA1P2-202ENST00000606848 1787 ntBASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.4□□□□□ -0.42
KCNIP4Q6PIL6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
KCNIP4Q6PIL6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC090616.6-203ENST00000579186 1945 ntBASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 KRT8P39-201ENST00000396270 1433 ntBASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC003669.1-201ENST00000334569 611 ntBASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AL359075.1-203ENST00000462729 1002 ntBASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AP003733.1-201ENST00000491725 852 ntBASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
KCNIP4Q6PIL6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms