Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AL591424.1-201ENST00000442569 1213 ntBASIC13.98□□□□□ -0.17
C11orf88Q6PI97 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 OR7E14P-202ENST00000530490 1290 ntBASIC13.98□□□□□ -0.17
C11orf88Q6PI97 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AC021087.4-201ENST00000563761 564 ntBASIC13.98□□□□□ -0.17
C11orf88Q6PI97 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 PGM5P2-202ENST00000637225 1043 ntBASIC13.98□□□□□ -0.17
C11orf88Q6PI97 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
C11orf88Q6PI97 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PMS2P7-201ENST00000506558 1336 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 LAGE3P1-201ENST00000425356 484 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 RPL13AP23-201ENST00000480739 586 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC145285.3-201ENST00000564603 959 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 TERC-201ENST00000602385 541 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC013467.2-201ENST00000605472 835 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 MIR7706-201ENST00000613747 67 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 CDC14C-201ENST00000428251 1719 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC026748.1-201ENST00000624349 3251 ntBASIC13.97□□□□□ -0.17
C11orf88Q6PI97 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
C11orf88Q6PI97 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 TCAF2P1-201ENST00000291129 2421 ntBASIC13.96□□□□□ -0.17
C11orf88Q6PI97 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C11orf88Q6PI97 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms