Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 RNA5SP410-201ENST00000516285 106 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 AC004233.3-201ENST00000607794 1269 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 AC003101.2-201ENST00000612557 442 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 AL138828.2-201ENST00000615812 383 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 AP005117.1-202ENST00000581724 1908 ntBASIC16.72■□□□□ 0.27
RNF43Q68DV7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF43Q68DV7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.72■□□□□ 0.27
RNF43Q68DV7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 AC004890.2-204ENST00000481968 304 ntBASIC16.71■□□□□ 0.27
RNF43Q68DV7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 RN7SL828P-201ENST00000607615 303 ntBASIC16.71■□□□□ 0.27
RNF43Q68DV7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.71■□□□□ 0.27
RNF43Q68DV7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RNF43Q68DV7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
RNF43Q68DV7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
RNF43Q68DV7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AC005622.1-201ENST00000636801 1703 ntBASIC16.7■□□□□ 0.26
RNF43Q68DV7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SPDYE17-201ENST00000412399 783 ntBASIC16.7■□□□□ 0.26
RNF43Q68DV7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AL080243.2-201ENST00000418783 582 ntBASIC16.7■□□□□ 0.26
RNF43Q68DV7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AL590560.3-201ENST00000623350 461 ntBASIC16.7■□□□□ 0.26
RNF43Q68DV7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF43Q68DV7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms