Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19■□□□□ 0.63
RNF20Q5VTR2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19■□□□□ 0.63
RNF20Q5VTR2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19■□□□□ 0.63
RNF20Q5VTR2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19■□□□□ 0.63
RNF20Q5VTR2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF20Q5VTR2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19■□□□□ 0.63
RNF20Q5VTR2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF20Q5VTR2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 AL512356.2-201ENST00000546955 174 ntBASIC18.99■□□□□ 0.63
RNF20Q5VTR2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 RN7SL828P-201ENST00000607615 303 ntBASIC18.99■□□□□ 0.63
RNF20Q5VTR2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 AC092384.3-202ENST00000564646 2873 ntBASIC18.99■□□□□ 0.63
RNF20Q5VTR2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF20Q5VTR2 TSPY26P-202ENST00000565928 3884 ntBASIC18.99■□□□□ 0.63
RNF20Q5VTR2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 TMBIM7P-203ENST00000641617 1718 ntBASIC18.98■□□□□ 0.63
RNF20Q5VTR2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 FO393414.2-201ENST00000405153 598 ntBASIC18.98■□□□□ 0.63
RNF20Q5VTR2 SPDYE17-201ENST00000412399 783 ntBASIC18.98■□□□□ 0.63
RNF20Q5VTR2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 MIR4453-201ENST00000584019 89 ntBASIC18.98■□□□□ 0.63
RNF20Q5VTR2 AC079781.4-201ENST00000641908 219 ntBASIC18.98■□□□□ 0.63
RNF20Q5VTR2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF20Q5VTR2 AC092127.1-201ENST00000567093 3455 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms