Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AL138709.1-201ENST00000614840 1693 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CD8B2-202ENST00000417670 633 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AC012618.1-201ENST00000461223 412 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 NPM1P43-201ENST00000558669 786 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 MIR4321-201ENST00000592276 80 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AL139011.1-202ENST00000642063 584 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 AL354989.2-201ENST00000435838 1540 ntBASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RSPO4Q2I0M5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CNN2P10-201ENST00000443067 918 ntBASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AC093813.1-201ENST00000605066 256 ntBASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AP001065.2-201ENST00000617205 644 ntBASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 AP001094.4-201ENST00000579008 2176 ntBASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RSPO4Q2I0M5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms