Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD47Q08722 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD47Q08722 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CD47Q08722 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CD47Q08722 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
CD47Q08722 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CD47Q08722 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 AC092127.1-201ENST00000567093 3455 ntBASIC14.84□□□□□ -0.03
CD47Q08722 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.84□□□□□ -0.03
CD47Q08722 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.84□□□□□ -0.03
CD47Q08722 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.84□□□□□ -0.03
CD47Q08722 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CD47Q08722 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.84□□□□□ -0.03
CD47Q08722 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.84□□□□□ -0.03
CD47Q08722 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 AC116407.3-201ENST00000623905 1129 ntBASIC14.84□□□□□ -0.03
CD47Q08722 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CD47Q08722 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.84□□□□□ -0.03
CD47Q08722 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CD47Q08722 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.84□□□□□ -0.03
CD47Q08722 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CD47Q08722 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CD47Q08722 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CD47Q08722 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
CD47Q08722 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CD47Q08722 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD47Q08722 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.83□□□□□ -0.03
CD47Q08722 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD47Q08722 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.83□□□□□ -0.03
CD47Q08722 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CD47Q08722 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD47Q08722 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 U82695.1-201ENST00000635752 1889 ntBASIC14.83□□□□□ -0.04
CD47Q08722 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
CD47Q08722 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CD47Q08722 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.83□□□□□ -0.04
CD47Q08722 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 PRSS29P-201ENST00000440800 595 ntBASIC14.83□□□□□ -0.04
CD47Q08722 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.83□□□□□ -0.04
CD47Q08722 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.83□□□□□ -0.04
CD47Q08722 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CD47Q08722 OR7E47P-204ENST00000575924 449 ntBASIC14.83□□□□□ -0.04
CD47Q08722 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CD47Q08722 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.83□□□□□ -0.04
CD47Q08722 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.83□□□□□ -0.04
CD47Q08722 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.83□□□□□ -0.04
CD47Q08722 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.83□□□□□ -0.04
CD47Q08722 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CD47Q08722 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.82□□□□□ -0.04
CD47Q08722 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CD47Q08722 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms