Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
EFNB1P98172 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB1P98172 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB1P98172 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
EFNB1P98172 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 AC136604.1-201ENST00000418535 575 ntBASIC14.19□□□□□ -0.14
EFNB1P98172 FAM8A3P-201ENST00000427218 844 ntBASIC14.19□□□□□ -0.14
EFNB1P98172 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.19□□□□□ -0.14
EFNB1P98172 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.19□□□□□ -0.14
EFNB1P98172 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB1P98172 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB1P98172 WASH3P-207ENST00000560956 1394 ntBASIC14.19□□□□□ -0.14
EFNB1P98172 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 FO538757.1-201ENST00000623083 1397 ntBASIC14.19□□□□□ -0.14
EFNB1P98172 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
EFNB1P98172 CICP14-201ENST00000629111 2732 ntBASIC14.19□□□□□ -0.14
EFNB1P98172 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNB1P98172 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 AC002056.1-201ENST00000395613 760 ntBASIC14.18□□□□□ -0.14
EFNB1P98172 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
EFNB1P98172 AC074386.1-202ENST00000463561 864 ntBASIC14.18□□□□□ -0.14
EFNB1P98172 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNB1P98172 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.18□□□□□ -0.14
EFNB1P98172 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNB1P98172 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 Z83851.2-201ENST00000609564 659 ntBASIC14.18□□□□□ -0.14
EFNB1P98172 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.18□□□□□ -0.14
EFNB1P98172 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
EFNB1P98172 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.18□□□□□ -0.14
EFNB1P98172 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
EFNB1P98172 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms