Protein–RNA interactions for Protein: P61204

ARF3, ADP-ribosylation factor 3, humanhuman

Predicted RBP Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3P61204 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ARF3P61204 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
ARF3P61204 AC002472.2-201ENST00000442739 958 ntBASIC15.16■□□□□ 0.02
ARF3P61204 FAM207CP-201ENST00000443486 507 ntBASIC15.16■□□□□ 0.02
ARF3P61204 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.16■□□□□ 0.02
ARF3P61204 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 AC074044.1-201ENST00000609673 707 ntBASIC15.16■□□□□ 0.02
ARF3P61204 AC009118.2-201ENST00000613275 655 ntBASIC15.16■□□□□ 0.02
ARF3P61204 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.16■□□□□ 0.02
ARF3P61204 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ARF3P61204 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ARF3P61204 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
ARF3P61204 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 AC136604.1-201ENST00000418535 575 ntBASIC15.15■□□□□ 0.02
ARF3P61204 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.15■□□□□ 0.02
ARF3P61204 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 SPDYE18-201ENST00000510091 1050 ntBASIC15.15■□□□□ 0.02
ARF3P61204 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.15■□□□□ 0.02
ARF3P61204 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
ARF3P61204 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.15■□□□□ 0.02
ARF3P61204 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 AC097359.3-201ENST00000603982 1210 ntBASIC15.15■□□□□ 0.02
ARF3P61204 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.15■□□□□ 0.02
ARF3P61204 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.15■□□□□ 0.02
ARF3P61204 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.15■□□□□ 0.02
ARF3P61204 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.15■□□□□ 0.02
ARF3P61204 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.15■□□□□ 0.02
ARF3P61204 AC008761.3-201ENST00000624803 892 ntBASIC15.15■□□□□ 0.02
ARF3P61204 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.15■□□□□ 0.02
ARF3P61204 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.15■□□□□ 0.02
ARF3P61204 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ARF3P61204 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ARF3P61204 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms