Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FOXO1B-201ENST00000504678 1527 ntBASIC17.06■□□□□ 0.32
VCPP55072 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 AC073439.1-201ENST00000624121 1774 ntBASIC17.05■□□□□ 0.32
VCPP55072 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VCPP55072 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.05■□□□□ 0.32
VCPP55072 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.05■□□□□ 0.32
VCPP55072 TTTY23B-201ENST00000442790 549 ntBASIC17.05■□□□□ 0.32
VCPP55072 KRT223P-202ENST00000449164 1292 ntBASIC17.05■□□□□ 0.32
VCPP55072 RN7SL837P-201ENST00000463010 287 ntBASIC17.05■□□□□ 0.32
VCPP55072 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.05■□□□□ 0.32
VCPP55072 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.05■□□□□ 0.32
VCPP55072 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 AC099568.2-201ENST00000609194 695 ntBASIC17.05■□□□□ 0.32
VCPP55072 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
VCPP55072 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 AP3S2-216ENST00000617003 1561 ntBASIC17.05■□□□□ 0.32
VCPP55072 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.05■□□□□ 0.32
VCPP55072 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCPP55072 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 KRT8P44-201ENST00000441609 1350 ntBASIC17.04■□□□□ 0.32
VCPP55072 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.04■□□□□ 0.32
VCPP55072 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 AC092933.1-201ENST00000393644 945 ntBASIC17.04■□□□□ 0.32
VCPP55072 AC087499.6-201ENST00000411576 835 ntBASIC17.04■□□□□ 0.32
VCPP55072 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.04■□□□□ 0.32
VCPP55072 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.04■□□□□ 0.32
VCPP55072 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 AC105233.2-201ENST00000523697 349 ntBASIC17.04■□□□□ 0.32
VCPP55072 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 AF228730.5-201ENST00000530288 346 ntBASIC17.04■□□□□ 0.32
VCPP55072 AC135586.1-201ENST00000539323 574 ntBASIC17.04■□□□□ 0.32
VCPP55072 SNX29P1-201ENST00000548357 1007 ntBASIC17.04■□□□□ 0.32
VCPP55072 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.04■□□□□ 0.32
VCPP55072 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VCPP55072 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.04■□□□□ 0.32
VCPP55072 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCPP55072 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCPP55072 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
VCPP55072 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.03■□□□□ 0.32
VCPP55072 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
VCPP55072 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.03■□□□□ 0.32
VCPP55072 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VCPP55072 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCPP55072 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCPP55072 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms