Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.4■□□□□ 0.7
NUP98P52948 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NUP98P52948 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.4■□□□□ 0.7
NUP98P52948 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NUP98P52948 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP98P52948 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUP98P52948 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.4■□□□□ 0.7
NUP98P52948 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.39■□□□□ 0.7
NUP98P52948 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.39■□□□□ 0.7
NUP98P52948 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP98P52948 FAM8A4P-201ENST00000435433 1213 ntBASIC19.39■□□□□ 0.7
NUP98P52948 AL591846.1-201ENST00000451736 433 ntBASIC19.39■□□□□ 0.7
NUP98P52948 IGHJ2P-201ENST00000454480 60 ntBASIC19.39■□□□□ 0.7
NUP98P52948 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP98P52948 RPSAP36-202ENST00000494591 1261 ntBASIC19.39■□□□□ 0.7
NUP98P52948 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.39■□□□□ 0.7
NUP98P52948 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP98P52948 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.39■□□□□ 0.7
NUP98P52948 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP98P52948 AP006547.1-201ENST00000563435 692 ntBASIC19.39■□□□□ 0.7
NUP98P52948 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP98P52948 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
NUP98P52948 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUP98P52948 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NUP98P52948 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.39■□□□□ 0.69
NUP98P52948 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.39■□□□□ 0.69
NUP98P52948 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.39■□□□□ 0.69
NUP98P52948 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 ACTG1P17-201ENST00000558391 1119 ntBASIC19.39■□□□□ 0.69
NUP98P52948 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.39■□□□□ 0.69
NUP98P52948 AC103810.3-201ENST00000583567 96 ntBASIC19.39■□□□□ 0.69
NUP98P52948 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.39■□□□□ 0.69
NUP98P52948 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.39■□□□□ 0.69
NUP98P52948 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.39■□□□□ 0.69
NUP98P52948 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.39■□□□□ 0.69
NUP98P52948 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP98P52948 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP98P52948 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.38■□□□□ 0.69
NUP98P52948 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 CYP2T1P-202ENST00000641596 2535 ntBASIC19.38■□□□□ 0.69
NUP98P52948 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.38■□□□□ 0.69
NUP98P52948 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.38■□□□□ 0.69
NUP98P52948 Z93015.1-201ENST00000451718 390 ntBASIC19.38■□□□□ 0.69
NUP98P52948 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.38■□□□□ 0.69
NUP98P52948 RN7SL713P-201ENST00000582127 302 ntBASIC19.38■□□□□ 0.69
NUP98P52948 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUP98P52948 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
NUP98P52948 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP98P52948 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AC079178.1-201ENST00000420915 656 ntBASIC19.37■□□□□ 0.69
NUP98P52948 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUP98P52948 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.37■□□□□ 0.69
NUP98P52948 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP98P52948 EEF1DP1-201ENST00000585891 896 ntBASIC19.37■□□□□ 0.69
NUP98P52948 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.37■□□□□ 0.69
NUP98P52948 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
NUP98P52948 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms