Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 MIR4259-201ENST00000584466 101 ntBASIC15.44■□□□□ 0.06
PDX1P52945 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.44■□□□□ 0.06
PDX1P52945 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.44■□□□□ 0.06
PDX1P52945 AL512343.1-201ENST00000605837 169 ntBASIC15.44■□□□□ 0.06
PDX1P52945 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.44■□□□□ 0.06
PDX1P52945 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDX1P52945 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.44■□□□□ 0.06
PDX1P52945 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 U82695.1-201ENST00000635752 1889 ntBASIC15.44■□□□□ 0.06
PDX1P52945 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDX1P52945 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PDX1P52945 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.43■□□□□ 0.06
PDX1P52945 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.43■□□□□ 0.06
PDX1P52945 RRP7BP-205ENST00000566851 833 ntBASIC15.43■□□□□ 0.06
PDX1P52945 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.43■□□□□ 0.06
PDX1P52945 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 MIR6799-201ENST00000620297 69 ntBASIC15.43■□□□□ 0.06
PDX1P52945 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PDX1P52945 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 LINC02199-201ENST00000506655 2702 ntBASIC15.43■□□□□ 0.06
PDX1P52945 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.43■□□□□ 0.06
PDX1P52945 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDX1P52945 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDX1P52945 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.42■□□□□ 0.06
PDX1P52945 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.42■□□□□ 0.06
PDX1P52945 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.42■□□□□ 0.06
PDX1P52945 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.42■□□□□ 0.06
PDX1P52945 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.42■□□□□ 0.06
PDX1P52945 MIR8072-201ENST00000614241 80 ntBASIC15.42■□□□□ 0.06
PDX1P52945 RPSAP52-203ENST00000622976 1023 ntBASIC15.42■□□□□ 0.06
PDX1P52945 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PDX1P52945 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDX1P52945 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms