Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KRT18P56-201ENST00000507275 550 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 RARRES2P8-201ENST00000566335 367 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGA2P52926 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 AC068137.2-201ENST00000605408 478 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.51□□□□□ -0.09
HMGA2P52926 AC099522.2-201ENST00000607001 744 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 AL031008.1-201ENST00000619963 541 ntBASIC14.51□□□□□ -0.09
HMGA2P52926 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.51□□□□□ -0.09
HMGA2P52926 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGA2P52926 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HMGA2P52926 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGA2P52926 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGA2P52926 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGA2P52926 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HMGA2P52926 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGA2P52926 RPL5P21-201ENST00000404620 815 ntBASIC14.5□□□□□ -0.09
HMGA2P52926 AC142381.1-201ENST00000426099 345 ntBASIC14.5□□□□□ -0.09
HMGA2P52926 KRT18P2-201ENST00000447938 1258 ntBASIC14.5□□□□□ -0.09
HMGA2P52926 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGA2P52926 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGA2P52926 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGA2P52926 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGA2P52926 AC008267.7-201ENST00000624570 1194 ntBASIC14.5□□□□□ -0.09
HMGA2P52926 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGA2P52926 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
HMGA2P52926 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGA2P52926 CYP4F24P-201ENST00000586049 1580 ntBASIC14.5□□□□□ -0.09
HMGA2P52926 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HMGA2P52926 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
HMGA2P52926 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
HMGA2P52926 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGA2P52926 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.49□□□□□ -0.09
HMGA2P52926 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 AL139010.1-201ENST00000454878 894 ntBASIC14.49□□□□□ -0.09
HMGA2P52926 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 AC112191.1-201ENST00000523689 701 ntBASIC14.49□□□□□ -0.09
HMGA2P52926 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 AC145285.3-201ENST00000564603 959 ntBASIC14.49□□□□□ -0.09
HMGA2P52926 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGA2P52926 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGA2P52926 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGA2P52926 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGA2P52926 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms