Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK7P50613 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDK7P50613 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK7P50613 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDK7P50613 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK7P50613 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDK7P50613 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CDK7P50613 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 REXO1L8P-201ENST00000604378 1897 ntBASIC17.48■□□□□ 0.39
CDK7P50613 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.48■□□□□ 0.39
CDK7P50613 PHKG1P2-201ENST00000457537 863 ntBASIC17.48■□□□□ 0.39
CDK7P50613 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK7P50613 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.48■□□□□ 0.39
CDK7P50613 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK7P50613 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.48■□□□□ 0.39
CDK7P50613 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK7P50613 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 PCDH8P1-201ENST00000428983 2773 ntBASIC17.48■□□□□ 0.39
CDK7P50613 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK7P50613 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
CDK7P50613 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK7P50613 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 AC136604.1-201ENST00000418535 575 ntBASIC17.47■□□□□ 0.39
CDK7P50613 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK7P50613 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 AC022137.2-201ENST00000503482 481 ntBASIC17.47■□□□□ 0.39
CDK7P50613 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.47■□□□□ 0.39
CDK7P50613 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK7P50613 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 AL118558.3-201ENST00000607414 1079 ntBASIC17.47■□□□□ 0.39
CDK7P50613 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDK7P50613 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.47■□□□□ 0.39
CDK7P50613 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDK7P50613 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CDK7P50613 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
CDK7P50613 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK7P50613 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.46■□□□□ 0.39
CDK7P50613 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
CDK7P50613 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDK7P50613 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms