Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 AL512356.2-201ENST00000546955 174 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 MIR4453-201ENST00000584019 89 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 LINC00554-201ENST00000564841 3011 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 TSPY26P-202ENST00000565928 3884 ntBASIC14.18□□□□□ -0.14
CSNK1A1P48729 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC103702.1-201ENST00000548801 2630 ntBASIC14.18□□□□□ -0.14
CSNK1A1P48729 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC004449.1-201ENST00000564240 433 ntBASIC14.18□□□□□ -0.14
CSNK1A1P48729 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AP001160.2-201ENST00000596071 487 ntBASIC14.18□□□□□ -0.14
CSNK1A1P48729 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 AC007326.2-201ENST00000624224 7579 ntBASIC14.18□□□□□ -0.14
CSNK1A1P48729 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CSNK1A1P48729 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSNK1A1P48729 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 HLA-J-203ENST00000494367 1087 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC069262.1-201ENST00000539058 672 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CSNK1A1P48729 BANF1P1-201ENST00000553684 263 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.17□□□□□ -0.14
CSNK1A1P48729 RN7SL828P-201ENST00000607615 303 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 AC139530.3-201ENST00000620344 690 ntBASIC14.17□□□□□ -0.14
CSNK1A1P48729 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms