Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.34□□□□□ -0.11
ATRXP46100 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ATRXP46100 PPY2P-201ENST00000582808 702 ntBASIC14.34□□□□□ -0.11
ATRXP46100 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.34□□□□□ -0.11
ATRXP46100 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ATRXP46100 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 ACKR1-201ENST00000368121 1240 ntBASIC14.34□□□□□ -0.11
ATRXP46100 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ATRXP46100 AC006158.1-201ENST00000610661 249 ntBASIC14.34□□□□□ -0.11
ATRXP46100 AC015912.3-201ENST00000619432 348 ntBASIC14.34□□□□□ -0.11
ATRXP46100 AC244250.3-201ENST00000620749 366 ntBASIC14.34□□□□□ -0.11
ATRXP46100 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.34□□□□□ -0.11
ATRXP46100 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATRXP46100 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
ATRXP46100 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATRXP46100 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.33□□□□□ -0.11
ATRXP46100 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
ATRXP46100 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATRXP46100 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
ATRXP46100 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATRXP46100 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATRXP46100 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.33□□□□□ -0.11
ATRXP46100 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
ATRXP46100 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATRXP46100 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.33□□□□□ -0.12
ATRXP46100 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.33□□□□□ -0.12
ATRXP46100 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.33□□□□□ -0.12
ATRXP46100 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.33□□□□□ -0.12
ATRXP46100 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 AC016396.2-201ENST00000562575 1417 ntBASIC14.33□□□□□ -0.12
ATRXP46100 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.33□□□□□ -0.12
ATRXP46100 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.33□□□□□ -0.12
ATRXP46100 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.33□□□□□ -0.12
ATRXP46100 CD8B2-202ENST00000417670 633 ntBASIC14.33□□□□□ -0.12
ATRXP46100 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.33□□□□□ -0.12
ATRXP46100 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 IGHV3-37-201ENST00000518544 340 ntBASIC14.33□□□□□ -0.12
ATRXP46100 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ATRXP46100 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.33□□□□□ -0.12
ATRXP46100 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.33□□□□□ -0.12
ATRXP46100 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATRXP46100 AL121723.1-201ENST00000445194 1519 ntBASIC14.33□□□□□ -0.12
ATRXP46100 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATRXP46100 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ATRXP46100 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.32□□□□□ -0.12
ATRXP46100 AC005622.1-201ENST00000636801 1703 ntBASIC14.32□□□□□ -0.12
ATRXP46100 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ATRXP46100 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATRXP46100 MIR4321-201ENST00000592276 80 ntBASIC14.32□□□□□ -0.12
ATRXP46100 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms