Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
NCAPD3P42695 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC27.26■■□□□ 1.96
NCAPD3P42695 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC27.26■■□□□ 1.95
NCAPD3P42695 HNRNPA1P41-201ENST00000397777 928 ntBASIC27.26■■□□□ 1.95
NCAPD3P42695 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC27.26■■□□□ 1.95
NCAPD3P42695 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC27.26■■□□□ 1.95
NCAPD3P42695 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 MEG3_2.1-201ENST00000611456 105 ntBASIC27.26■■□□□ 1.95
NCAPD3P42695 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NCAPD3P42695 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NCAPD3P42695 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
NCAPD3P42695 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NCAPD3P42695 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NCAPD3P42695 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC27.26■■□□□ 1.95
NCAPD3P42695 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC27.26■■□□□ 1.95
NCAPD3P42695 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC27.25■■□□□ 1.95
NCAPD3P42695 RPL18P13-201ENST00000478088 569 ntBASIC27.25■■□□□ 1.95
NCAPD3P42695 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 AC090857.1-201ENST00000527400 390 ntBASIC27.25■■□□□ 1.95
NCAPD3P42695 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC27.25■■□□□ 1.95
NCAPD3P42695 MIR4683-201ENST00000579659 81 ntBASIC27.25■■□□□ 1.95
NCAPD3P42695 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC27.25■■□□□ 1.95
NCAPD3P42695 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
NCAPD3P42695 AC127024.7-201ENST00000625101 200 ntBASIC27.25■■□□□ 1.95
NCAPD3P42695 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 AC025271.4-201ENST00000621477 1726 ntBASIC27.25■■□□□ 1.95
NCAPD3P42695 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
NCAPD3P42695 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC27.25■■□□□ 1.95
NCAPD3P42695 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 FOS-204ENST00000554617 796 ntTSL 2 BASIC27.25■■□□□ 1.95
NCAPD3P42695 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC27.25■■□□□ 1.95
NCAPD3P42695 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC27.25■■□□□ 1.95
NCAPD3P42695 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
NCAPD3P42695 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 UBALD1-205ENST00000590891 2641 ntBASIC27.24■■□□□ 1.95
NCAPD3P42695 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
NCAPD3P42695 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
NCAPD3P42695 AC074138.1-201ENST00000611182 1303 ntBASIC27.24■■□□□ 1.95
NCAPD3P42695 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC27.24■■□□□ 1.95
NCAPD3P42695 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC27.24■■□□□ 1.95
NCAPD3P42695 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC27.24■■□□□ 1.95
NCAPD3P42695 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 PPOX-204ENST00000462866 473 ntTSL 5 BASIC27.24■■□□□ 1.95
NCAPD3P42695 AC130709.1-201ENST00000484779 1212 ntBASIC27.24■■□□□ 1.95
NCAPD3P42695 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
NCAPD3P42695 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC27.24■■□□□ 1.95
NCAPD3P42695 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC27.24■■□□□ 1.95
NCAPD3P42695 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC27.24■■□□□ 1.95
NCAPD3P42695 RPL17P45-201ENST00000586289 509 ntBASIC27.24■■□□□ 1.95
NCAPD3P42695 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
NCAPD3P42695 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC27.24■■□□□ 1.95
NCAPD3P42695 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NCAPD3P42695 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
NCAPD3P42695 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NCAPD3P42695 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NCAPD3P42695 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
NCAPD3P42695 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC27.23■■□□□ 1.95
NCAPD3P42695 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC27.23■■□□□ 1.95
NCAPD3P42695 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC27.23■■□□□ 1.95
NCAPD3P42695 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC27.23■■□□□ 1.95
NCAPD3P42695 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC27.23■■□□□ 1.95
NCAPD3P42695 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
NCAPD3P42695 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NCAPD3P42695 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms