Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GDNFP39905 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.94□□□□□ -0.18
GDNFP39905 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.94□□□□□ -0.18
GDNFP39905 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GDNFP39905 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GDNFP39905 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.93□□□□□ -0.18
GDNFP39905 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 AC098831.1-202ENST00000438821 336 ntBASIC13.93□□□□□ -0.18
GDNFP39905 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 IGHV3-65-201ENST00000523210 341 ntBASIC13.93□□□□□ -0.18
GDNFP39905 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CYP2A7P1-201ENST00000595391 815 ntBASIC13.93□□□□□ -0.18
GDNFP39905 AC008667.4-201ENST00000607370 168 ntBASIC13.93□□□□□ -0.18
GDNFP39905 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.93□□□□□ -0.18
GDNFP39905 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.93□□□□□ -0.18
GDNFP39905 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.93□□□□□ -0.18
GDNFP39905 REXO1L3P-201ENST00000622202 1288 ntBASIC13.93□□□□□ -0.18
GDNFP39905 AC116407.3-201ENST00000623905 1129 ntBASIC13.93□□□□□ -0.18
GDNFP39905 AF228730.7-201ENST00000641842 219 ntBASIC13.93□□□□□ -0.18
GDNFP39905 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 AC105250.1-201ENST00000509378 2057 ntBASIC13.93□□□□□ -0.18
GDNFP39905 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
GDNFP39905 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
GDNFP39905 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.93□□□□□ -0.18
GDNFP39905 AC112693.3-201ENST00000624819 1983 ntBASIC13.92□□□□□ -0.18
GDNFP39905 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 HLA-A-201ENST00000376802 1334 ntBASIC13.92□□□□□ -0.18
GDNFP39905 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GDNFP39905 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.92□□□□□ -0.18
GDNFP39905 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GDNFP39905 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.92□□□□□ -0.18
GDNFP39905 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 AP001005.1-201ENST00000571755 1248 ntBASIC13.92□□□□□ -0.18
GDNFP39905 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.92□□□□□ -0.18
GDNFP39905 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GDNFP39905 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GDNFP39905 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms