Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.92■□□□□ 0.78
COL15A1P39059 AP001582.1-201ENST00000525856 295 ntBASIC19.92■□□□□ 0.78
COL15A1P39059 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.92■□□□□ 0.78
COL15A1P39059 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.92■□□□□ 0.78
COL15A1P39059 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL15A1P39059 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
COL15A1P39059 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
COL15A1P39059 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.91■□□□□ 0.78
COL15A1P39059 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.91■□□□□ 0.78
COL15A1P39059 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.91■□□□□ 0.78
COL15A1P39059 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.91■□□□□ 0.78
COL15A1P39059 AC091271.1-201ENST00000611877 1162 ntBASIC19.91■□□□□ 0.78
COL15A1P39059 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL15A1P39059 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL15A1P39059 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL15A1P39059 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL15A1P39059 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 MIR326-201ENST00000362220 95 ntBASIC19.9■□□□□ 0.78
COL15A1P39059 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
COL15A1P39059 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.9■□□□□ 0.78
COL15A1P39059 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.9■□□□□ 0.78
COL15A1P39059 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC19.9■□□□□ 0.78
COL15A1P39059 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COL15A1P39059 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.9■□□□□ 0.78
COL15A1P39059 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL15A1P39059 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.89■□□□□ 0.78
COL15A1P39059 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.89■□□□□ 0.78
COL15A1P39059 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL15A1P39059 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL15A1P39059 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
COL15A1P39059 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.89■□□□□ 0.77
COL15A1P39059 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 FAM197Y7-201ENST00000432892 766 ntBASIC19.89■□□□□ 0.77
COL15A1P39059 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.89■□□□□ 0.77
COL15A1P39059 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.89■□□□□ 0.77
COL15A1P39059 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.89■□□□□ 0.77
COL15A1P39059 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL15A1P39059 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.89■□□□□ 0.77
COL15A1P39059 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL15A1P39059 AC018892.3-201ENST00000623986 2499 ntBASIC19.89■□□□□ 0.77
COL15A1P39059 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
COL15A1P39059 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.88■□□□□ 0.77
COL15A1P39059 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms