Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 RPS15P9-201ENST00000494093 319 ntBASIC13.17□□□□□ -0.3
SNCAP37840 SLC25A6P2-201ENST00000497974 877 ntBASIC13.17□□□□□ -0.3
SNCAP37840 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.17□□□□□ -0.3
SNCAP37840 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.17□□□□□ -0.3
SNCAP37840 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.17□□□□□ -0.3
SNCAP37840 REXO1L6P-202ENST00000619970 1078 ntBASIC13.17□□□□□ -0.3
SNCAP37840 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 SLC22A20-204ENST00000530038 1673 ntBASIC13.17□□□□□ -0.3
SNCAP37840 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.16□□□□□ -0.3
SNCAP37840 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.16□□□□□ -0.3
SNCAP37840 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SNCAP37840 TSPY19P-201ENST00000418461 509 ntBASIC13.16□□□□□ -0.3
SNCAP37840 TSPY18P-201ENST00000441642 509 ntBASIC13.16□□□□□ -0.3
SNCAP37840 SAPCD2P3-201ENST00000455031 850 ntBASIC13.16□□□□□ -0.3
SNCAP37840 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.16□□□□□ -0.3
SNCAP37840 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.16□□□□□ -0.3
SNCAP37840 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.16□□□□□ -0.3
SNCAP37840 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.16□□□□□ -0.3
SNCAP37840 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.16□□□□□ -0.3
SNCAP37840 AC107918.4-202ENST00000641623 219 ntBASIC13.16□□□□□ -0.3
SNCAP37840 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.16□□□□□ -0.3
SNCAP37840 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.16□□□□□ -0.3
SNCAP37840 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.16□□□□□ -0.3
SNCAP37840 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.16□□□□□ -0.3
SNCAP37840 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SNCAP37840 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 AC087386.2-201ENST00000623212 4637 ntBASIC13.16□□□□□ -0.3
SNCAP37840 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNCAP37840 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNCAP37840 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNCAP37840 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.15□□□□□ -0.3
SNCAP37840 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.15□□□□□ -0.3
SNCAP37840 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNCAP37840 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.15□□□□□ -0.3
SNCAP37840 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCAP37840 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SNCAP37840 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms