Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.82■□□□□ 0.28
PCK1P35558 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.82■□□□□ 0.28
PCK1P35558 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
PCK1P35558 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 SLC25A39P2-201ENST00000537614 270 ntBASIC16.82■□□□□ 0.28
PCK1P35558 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 AC243562.2-201ENST00000561247 970 ntBASIC16.82■□□□□ 0.28
PCK1P35558 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.82■□□□□ 0.28
PCK1P35558 AC055717.3-201ENST00000622967 595 ntBASIC16.82■□□□□ 0.28
PCK1P35558 AL513210.1-201ENST00000629608 234 ntBASIC16.82■□□□□ 0.28
PCK1P35558 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.82■□□□□ 0.28
PCK1P35558 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCK1P35558 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.82■□□□□ 0.28
PCK1P35558 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 UXT-AS1-201ENST00000590504 1525 ntBASIC16.81■□□□□ 0.28
PCK1P35558 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 AC134407.2-201ENST00000625089 1978 ntBASIC16.81■□□□□ 0.28
PCK1P35558 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCK1P35558 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.81■□□□□ 0.28
PCK1P35558 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.81■□□□□ 0.28
PCK1P35558 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.81■□□□□ 0.28
PCK1P35558 MIR4469-201ENST00000583919 79 ntBASIC16.81■□□□□ 0.28
PCK1P35558 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.81■□□□□ 0.28
PCK1P35558 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.81■□□□□ 0.28
PCK1P35558 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PCK1P35558 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.81■□□□□ 0.28
PCK1P35558 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCK1P35558 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.8■□□□□ 0.28
PCK1P35558 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.8■□□□□ 0.28
PCK1P35558 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.8■□□□□ 0.28
PCK1P35558 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCK1P35558 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms