Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KRT9P35527 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KRT9P35527 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KRT9P35527 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.45■□□□□ 0.38
KRT9P35527 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 FAM58CP-201ENST00000435741 640 ntBASIC17.44■□□□□ 0.38
KRT9P35527 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 RARRES2P8-201ENST00000566335 367 ntBASIC17.44■□□□□ 0.38
KRT9P35527 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 AC099522.2-201ENST00000607001 744 ntBASIC17.44■□□□□ 0.38
KRT9P35527 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KRT9P35527 AC112693.3-201ENST00000624819 1983 ntBASIC17.44■□□□□ 0.38
KRT9P35527 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.44■□□□□ 0.38
KRT9P35527 AC009090.5-201ENST00000624886 2285 ntBASIC17.44■□□□□ 0.38
KRT9P35527 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.44■□□□□ 0.38
KRT9P35527 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KRT9P35527 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 MCCD1P2-201ENST00000423228 335 ntBASIC17.43■□□□□ 0.38
KRT9P35527 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 AL671277.1-201ENST00000429656 993 ntBASIC17.43■□□□□ 0.38
KRT9P35527 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.43■□□□□ 0.38
KRT9P35527 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.43■□□□□ 0.38
KRT9P35527 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.43■□□□□ 0.38
KRT9P35527 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
KRT9P35527 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.43■□□□□ 0.38
KRT9P35527 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRT9P35527 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRT9P35527 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms