Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN6P29350 AC098859.1-201ENST00000502915 1238 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PTPN6P29350 AC079140.1-201ENST00000508039 487 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTPN6P29350 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 AC099063.4-201ENST00000641099 1602 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN6P29350 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN6P29350 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN6P29350 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN6P29350 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.12■□□□□ 0.01
PTPN6P29350 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.11■□□□□ 0.01
PTPN6P29350 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN6P29350 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.11■□□□□ 0.01
PTPN6P29350 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.11■□□□□ 0.01
PTPN6P29350 AC027612.4-201ENST00000605371 583 ntBASIC15.11■□□□□ 0.01
PTPN6P29350 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN6P29350 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN6P29350 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN6P29350 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 AC091951.1-201ENST00000512854 2465 ntBASIC15.1■□□□□ 0.01
PTPN6P29350 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN6P29350 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PTPN6P29350 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.1■□□□□ 0.01
PTPN6P29350 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.1■□□□□ 0.01
PTPN6P29350 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.1■□□□□ 0.01
PTPN6P29350 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTPN6P29350 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms