Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 AC105250.1-201ENST00000509378 2057 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 AC232323.1-201ENST00000540724 2099 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 REXO1L5P-201ENST00000622260 2098 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.52□□□□□ -0.25
VAMP1P23763 C18orf15-201ENST00000623680 2534 ntBASIC13.52□□□□□ -0.25
VAMP1P23763 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VAMP1P23763 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
VAMP1P23763 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VAMP1P23763 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 HAUS4P1-201ENST00000406739 1145 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 CHCHD2P8-201ENST00000429873 447 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.51□□□□□ -0.25
VAMP1P23763 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 AC090142.2-201ENST00000483263 416 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
VAMP1P23763 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.51□□□□□ -0.25
VAMP1P23763 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.51□□□□□ -0.25
VAMP1P23763 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VAMP1P23763 AC007191.1-201ENST00000623179 2995 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VAMP1P23763 AL137784.3-201ENST00000623858 2288 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VAMP1P23763 AC117489.1-201ENST00000625169 3217 ntBASIC13.51□□□□□ -0.25
VAMP1P23763 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VAMP1P23763 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.5□□□□□ -0.25
VAMP1P23763 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.5□□□□□ -0.25
VAMP1P23763 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.5□□□□□ -0.25
VAMP1P23763 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 GRK6P1-201ENST00000400595 1711 ntBASIC13.5□□□□□ -0.25
VAMP1P23763 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
VAMP1P23763 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.5□□□□□ -0.25
VAMP1P23763 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.5□□□□□ -0.25
VAMP1P23763 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VAMP1P23763 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VAMP1P23763 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms