Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAB3BP20337 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RAB3BP20337 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB3BP20337 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB3BP20337 RNU1-129P-201ENST00000384064 167 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 AC211429.1-201ENST00000415277 523 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 RPS15P9-201ENST00000494093 319 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 RN7SL850P-201ENST00000579959 291 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 U1.21-201ENST00000580816 167 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 AC006557.2-201ENST00000592985 1240 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
RAB3BP20337 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB3BP20337 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB3BP20337 AC009090.5-201ENST00000624886 2285 ntBASIC14.01□□□□□ -0.17
RAB3BP20337 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB3BP20337 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14□□□□□ -0.17
RAB3BP20337 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 FGD5P1-202ENST00000614866 2498 ntBASIC14□□□□□ -0.17
RAB3BP20337 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB3BP20337 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14□□□□□ -0.17
RAB3BP20337 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14□□□□□ -0.17
RAB3BP20337 SART3-203ENST00000546611 1184 ntBASIC14□□□□□ -0.17
RAB3BP20337 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
RAB3BP20337 AL031055.1-201ENST00000606362 631 ntBASIC14□□□□□ -0.17
RAB3BP20337 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14□□□□□ -0.17
RAB3BP20337 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14□□□□□ -0.17
RAB3BP20337 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14□□□□□ -0.17
RAB3BP20337 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14□□□□□ -0.17
RAB3BP20337 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14□□□□□ -0.17
RAB3BP20337 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14□□□□□ -0.17
RAB3BP20337 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 AC134407.2-201ENST00000625089 1978 ntBASIC14□□□□□ -0.17
RAB3BP20337 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB3BP20337 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB3BP20337 WASH6P-202ENST00000359512 1437 ntBASIC13.99□□□□□ -0.17
RAB3BP20337 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB3BP20337 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB3BP20337 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.99□□□□□ -0.17
RAB3BP20337 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB3BP20337 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB3BP20337 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB3BP20337 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB3BP20337 PMS2P4-201ENST00000412466 1052 ntBASIC13.99□□□□□ -0.17
RAB3BP20337 PCED1CP-201ENST00000419887 785 ntBASIC13.99□□□□□ -0.17
RAB3BP20337 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB3BP20337 AP002469.2-201ENST00000531724 424 ntBASIC13.99□□□□□ -0.17
RAB3BP20337 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RAB3BP20337 MIR3909-201ENST00000579518 119 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms