Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.42■□□□□ 0.54
ERCC3P19447 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ERCC3P19447 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
ERCC3P19447 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
ERCC3P19447 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC3P19447 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.41■□□□□ 0.54
ERCC3P19447 AC007389.4-201ENST00000454674 793 ntBASIC18.41■□□□□ 0.54
ERCC3P19447 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.41■□□□□ 0.54
ERCC3P19447 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.41■□□□□ 0.54
ERCC3P19447 AL033527.5-201ENST00000641382 801 ntBASIC18.41■□□□□ 0.54
ERCC3P19447 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ERCC3P19447 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.41■□□□□ 0.54
ERCC3P19447 HYMAI-201ENST00000635591 3347 ntBASIC18.41■□□□□ 0.54
ERCC3P19447 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ERCC3P19447 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.4■□□□□ 0.54
ERCC3P19447 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 Z97205.2-201ENST00000564697 1639 ntBASIC18.4■□□□□ 0.54
ERCC3P19447 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
ERCC3P19447 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ERCC3P19447 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ERCC3P19447 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC3P19447 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ERCC3P19447 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC3P19447 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC3P19447 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.39■□□□□ 0.54
ERCC3P19447 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC3P19447 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ERCC3P19447 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC3P19447 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ERCC3P19447 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ERCC3P19447 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ERCC3P19447 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ERCC3P19447 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ERCC3P19447 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.39■□□□□ 0.53
ERCC3P19447 AC104596.2-201ENST00000512793 793 ntBASIC18.39■□□□□ 0.53
ERCC3P19447 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.39■□□□□ 0.53
ERCC3P19447 AC092552.1-201ENST00000547243 906 ntBASIC18.39■□□□□ 0.53
ERCC3P19447 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms