Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 HNRNPDP1-201ENST00000439535 754 ntBASIC16.02■□□□□ 0.16
KRT4P19013 PRSS29P-201ENST00000440800 595 ntBASIC16.02■□□□□ 0.16
KRT4P19013 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT4P19013 AC002347.1-201ENST00000569543 541 ntBASIC16.02■□□□□ 0.16
KRT4P19013 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.02■□□□□ 0.16
KRT4P19013 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
KRT4P19013 AL009183.1-201ENST00000603760 355 ntBASIC16.02■□□□□ 0.16
KRT4P19013 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.02■□□□□ 0.16
KRT4P19013 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT4P19013 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.02■□□□□ 0.15
KRT4P19013 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
KRT4P19013 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 AC013726.1-201ENST00000563747 2285 ntBASIC16.02■□□□□ 0.15
KRT4P19013 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.02■□□□□ 0.15
KRT4P19013 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
KRT4P19013 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 KRT8P44-201ENST00000441609 1350 ntBASIC16.01■□□□□ 0.15
KRT4P19013 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
KRT4P19013 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT4P19013 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
KRT4P19013 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
KRT4P19013 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT4P19013 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.01■□□□□ 0.15
KRT4P19013 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
KRT4P19013 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.01■□□□□ 0.15
KRT4P19013 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
KRT4P19013 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16■□□□□ 0.15
KRT4P19013 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16■□□□□ 0.15
KRT4P19013 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16■□□□□ 0.15
KRT4P19013 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
KRT4P19013 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
KRT4P19013 DDT-204ENST00000404092 805 ntTSL 3 BASIC16■□□□□ 0.15
KRT4P19013 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
KRT4P19013 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16■□□□□ 0.15
KRT4P19013 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 MIR4751-201ENST00000578027 74 ntBASIC16■□□□□ 0.15
KRT4P19013 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16■□□□□ 0.15
KRT4P19013 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT4P19013 LINC00552-201ENST00000625151 2579 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 407.2 ms