Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 RPL37AP1-201ENST00000412502 279 ntBASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 MRPS18AP1-201ENST00000414458 589 ntBASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 BANF1P1-201ENST00000553684 263 ntBASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AL079307.3-201ENST00000556114 283 ntBASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AL136379.1-201ENST00000623471 2642 ntBASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMIGD3P0DMS9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 AC087499.5-201ENST00000452760 1342 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 LINC01144-201ENST00000626198 1710 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SERBP1P5-201ENST00000510079 1181 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 AL133215.2-201ENST00000609242 977 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 GGT3P-204ENST00000453783 1664 ntBASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
TMIGD3P0DMS9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.43□□□□□ -0.1
TMIGD3P0DMS9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms