Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PKHD1P08F94 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC105020.1-201ENST00000435356 2205 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
PKHD1P08F94 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC022188.1-201ENST00000620960 1664 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 SLC16A6P1-201ENST00000413214 1059 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 RCC2P8-201ENST00000502779 1035 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC9.92□□□□□ -0.82
PKHD1P08F94 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC020922.3-201ENST00000595064 547 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 AC087045.2-201ENST00000606279 1003 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 LINC02199-201ENST00000506655 2702 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 DDX39AP1-201ENST00000445147 1181 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PKHD1P08F94 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
PKHD1P08F94 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 NPPA-201ENST00000376476 728 ntTSL 3 BASIC9.92□□□□□ -0.82
PKHD1P08F94 MIR5196-201ENST00000578146 115 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC9.92□□□□□ -0.82
PKHD1P08F94 ETV2-207ENST00000619399 994 ntTSL 5 BASIC9.92□□□□□ -0.82
PKHD1P08F94 AC005915.1-201ENST00000624912 2018 ntBASIC9.92□□□□□ -0.82
PKHD1P08F94 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PKHD1P08F94 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 KRT8P4-201ENST00000509735 1454 ntBASIC9.91□□□□□ -0.82
PKHD1P08F94 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC9.91□□□□□ -0.82
PKHD1P08F94 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 AC006453.1-201ENST00000636037 1257 ntBASIC9.91□□□□□ -0.82
PKHD1P08F94 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC9.91□□□□□ -0.82
PKHD1P08F94 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC9.91□□□□□ -0.82
PKHD1P08F94 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC9.91□□□□□ -0.82
PKHD1P08F94 NOC2LP1-201ENST00000450578 752 ntBASIC9.91□□□□□ -0.82
PKHD1P08F94 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC9.91□□□□□ -0.82
PKHD1P08F94 AP002803.1-201ENST00000528836 498 ntBASIC9.91□□□□□ -0.82
PKHD1P08F94 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC9.91□□□□□ -0.82
PKHD1P08F94 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
PKHD1P08F94 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.91□□□□□ -0.82
PKHD1P08F94 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PKHD1P08F94 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms