Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TPM3P06753 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 AC136632.2-201ENST00000512891 861 ntBASIC17.91■□□□□ 0.46
TPM3P06753 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.91■□□□□ 0.46
TPM3P06753 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.91■□□□□ 0.46
TPM3P06753 MIR3909-201ENST00000579518 119 ntBASIC17.91■□□□□ 0.46
TPM3P06753 AC025062.2-201ENST00000605477 670 ntBASIC17.91■□□□□ 0.46
TPM3P06753 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM3P06753 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM3P06753 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TPM3P06753 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM3P06753 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM3P06753 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.9■□□□□ 0.46
TPM3P06753 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM3P06753 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TPM3P06753 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM3P06753 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM3P06753 AC008667.4-201ENST00000607370 168 ntBASIC17.9■□□□□ 0.46
TPM3P06753 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM3P06753 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TPM3P06753 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 FGD5P1-202ENST00000614866 2498 ntBASIC17.9■□□□□ 0.46
TPM3P06753 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM3P06753 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TPM3P06753 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TPM3P06753 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.89■□□□□ 0.46
TPM3P06753 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TPM3P06753 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TPM3P06753 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
TPM3P06753 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM3P06753 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TPM3P06753 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 AC126365.1-201ENST00000578585 1514 ntBASIC17.89■□□□□ 0.45
TPM3P06753 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TPM3P06753 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.89■□□□□ 0.45
TPM3P06753 PMS2P4-201ENST00000412466 1052 ntBASIC17.89■□□□□ 0.45
TPM3P06753 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 MIR4515-201ENST00000584082 81 ntBASIC17.89■□□□□ 0.45
TPM3P06753 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.89■□□□□ 0.45
TPM3P06753 AL365330.1-201ENST00000607459 531 ntBASIC17.89■□□□□ 0.45
TPM3P06753 MIR1199-201ENST00000621445 119 ntBASIC17.89■□□□□ 0.45
TPM3P06753 AL358472.4-201ENST00000633140 710 ntBASIC17.89■□□□□ 0.45
TPM3P06753 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.89■□□□□ 0.45
TPM3P06753 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TPM3P06753 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TPM3P06753 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.89■□□□□ 0.45
TPM3P06753 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TPM3P06753 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TPM3P06753 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
TPM3P06753 AC139749.1-202ENST00000617529 3139 ntBASIC17.88■□□□□ 0.45
TPM3P06753 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TPM3P06753 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms