Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CICP13-201ENST00000422015 2789 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 MIR4321-201ENST00000592276 80 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AL513190.1-201ENST00000621254 727 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 AC092850.2-201ENST00000623821 2697 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.35□□□□□ -0.11
HLA-DQA2P01906 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DQA2P01906 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 MED15P5-201ENST00000423150 992 ntBASIC14.34□□□□□ -0.11
HLA-DQA2P01906 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AC120114.3-201ENST00000611923 658 ntBASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DQA2P01906 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms