Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 AC008132.1-202ENST00000342005 1389 ntBASIC17.88■□□□□ 0.45
ALDH1A1P00352 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 HLA-A-202ENST00000376806 1854 ntBASIC17.88■□□□□ 0.45
ALDH1A1P00352 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.88■□□□□ 0.45
ALDH1A1P00352 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALDH1A1P00352 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 PPY2P-201ENST00000582808 702 ntBASIC17.87■□□□□ 0.45
ALDH1A1P00352 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 AL133499.1-201ENST00000596207 608 ntBASIC17.87■□□□□ 0.45
ALDH1A1P00352 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 ZACNP1-201ENST00000612259 710 ntBASIC17.87■□□□□ 0.45
ALDH1A1P00352 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALDH1A1P00352 PCDHB18P-201ENST00000524813 2368 ntBASIC17.87■□□□□ 0.45
ALDH1A1P00352 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.87■□□□□ 0.45
ALDH1A1P00352 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 AC069218.1-201ENST00000435269 762 ntBASIC17.86■□□□□ 0.45
ALDH1A1P00352 AC114501.1-201ENST00000445949 172 ntBASIC17.86■□□□□ 0.45
ALDH1A1P00352 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 HLA-C-210ENST00000640219 976 ntBASIC17.86■□□□□ 0.45
ALDH1A1P00352 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALDH1A1P00352 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
ALDH1A1P00352 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ALDH1A1P00352 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALDH1A1P00352 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms