Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCA1O95477 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCA1O95477 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCA1O95477 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.38□□□□□ -0.27
ABCA1O95477 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCA1O95477 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCA1O95477 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ABCA1O95477 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCA1O95477 RPL7P3-201ENST00000441388 714 ntBASIC13.38□□□□□ -0.27
ABCA1O95477 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.38□□□□□ -0.27
ABCA1O95477 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.38□□□□□ -0.27
ABCA1O95477 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.38□□□□□ -0.27
ABCA1O95477 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ABCA1O95477 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ABCA1O95477 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 SNX33P1-201ENST00000592116 1762 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 AC006277.1-201ENST00000624348 1610 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 AC093726.1-201ENST00000608064 963 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 LINC02012-201ENST00000608206 1725 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.37□□□□□ -0.27
ABCA1O95477 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ABCA1O95477 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ABCA1O95477 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.37□□□□□ -0.27
ABCA1O95477 AL355994.2-201ENST00000447882 704 ntBASIC13.37□□□□□ -0.27
ABCA1O95477 AC093724.1-201ENST00000448659 1027 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms