Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 AC138028.6-201ENST00000616106 1482 ntBASIC20.61■□□□□ 0.89
LTN1O94822 AL596087.1-201ENST00000400979 1969 ntBASIC20.61■□□□□ 0.89
LTN1O94822 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LTN1O94822 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LTN1O94822 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.6■□□□□ 0.89
LTN1O94822 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
LTN1O94822 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.6■□□□□ 0.89
LTN1O94822 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.6■□□□□ 0.89
LTN1O94822 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.6■□□□□ 0.89
LTN1O94822 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LTN1O94822 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTN1O94822 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LTN1O94822 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.59■□□□□ 0.89
LTN1O94822 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.59■□□□□ 0.89
LTN1O94822 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 AC044849.1-201ENST00000519737 1188 ntBASIC20.59■□□□□ 0.89
LTN1O94822 AL451050.2-201ENST00000606967 682 ntBASIC20.59■□□□□ 0.89
LTN1O94822 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 AC009090.5-201ENST00000624886 2285 ntBASIC20.59■□□□□ 0.89
LTN1O94822 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 AC112504.1-201ENST00000623415 1841 ntBASIC20.59■□□□□ 0.89
LTN1O94822 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 NKILA-202ENST00000614771 2598 ntBASIC20.59■□□□□ 0.89
LTN1O94822 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LTN1O94822 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 SERPINA13P-202ENST00000478994 924 ntBASIC20.59■□□□□ 0.89
LTN1O94822 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20.59■□□□□ 0.89
LTN1O94822 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.59■□□□□ 0.89
LTN1O94822 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.59■□□□□ 0.89
LTN1O94822 AC097724.1-201ENST00000609581 426 ntBASIC20.59■□□□□ 0.89
LTN1O94822 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LTN1O94822 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTN1O94822 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.59■□□□□ 0.89
LTN1O94822 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LTN1O94822 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LTN1O94822 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LTN1O94822 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.58■□□□□ 0.89
LTN1O94822 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LTN1O94822 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.58■□□□□ 0.89
LTN1O94822 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.58■□□□□ 0.89
LTN1O94822 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.58■□□□□ 0.89
LTN1O94822 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.58■□□□□ 0.89
LTN1O94822 AC013355.1-201ENST00000562625 723 ntBASIC20.58■□□□□ 0.89
LTN1O94822 AC020914.3-201ENST00000594712 304 ntBASIC20.58■□□□□ 0.89
LTN1O94822 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.58■□□□□ 0.89
LTN1O94822 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTN1O94822 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTN1O94822 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTN1O94822 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
LTN1O94822 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTN1O94822 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.88
LTN1O94822 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.57■□□□□ 0.88
LTN1O94822 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.57■□□□□ 0.88
LTN1O94822 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTN1O94822 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LTN1O94822 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms