Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 AC025580.3-201ENST00000617932 1424 ntBASIC14.18□□□□□ -0.14
ZNF254O75437 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF254O75437 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF254O75437 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 AC004877.2-201ENST00000623941 599 ntBASIC14.18□□□□□ -0.14
ZNF254O75437 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF254O75437 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF254O75437 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF254O75437 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 AP003680.1-201ENST00000598970 3660 ntBASIC14.18□□□□□ -0.14
ZNF254O75437 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF254O75437 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF254O75437 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 AC087481.3-201ENST00000602886 1894 ntBASIC14.17□□□□□ -0.14
ZNF254O75437 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 MRPL3P1-201ENST00000400109 1033 ntBASIC14.17□□□□□ -0.14
ZNF254O75437 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 GPX1P2-201ENST00000429271 606 ntBASIC14.17□□□□□ -0.14
ZNF254O75437 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF254O75437 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF254O75437 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF254O75437 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF254O75437 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF254O75437 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.16□□□□□ -0.14
ZNF254O75437 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZNF254O75437 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ZNF254O75437 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.16□□□□□ -0.14
ZNF254O75437 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZNF254O75437 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms