Protein–RNA interactions for Protein: O60565

GREM1, Gremlin-1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GREM1O60565 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 ACKR1-201ENST00000368121 1240 ntBASIC16.06■□□□□ 0.16
GREM1O60565 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 BAATP1-201ENST00000412284 1225 ntBASIC16.06■□□□□ 0.16
GREM1O60565 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 AC012441.1-201ENST00000446669 685 ntBASIC16.06■□□□□ 0.16
GREM1O60565 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 PTP4A1P2-201ENST00000546033 454 ntBASIC16.06■□□□□ 0.16
GREM1O60565 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.06■□□□□ 0.16
GREM1O60565 AC009486.1-201ENST00000569860 813 ntBASIC16.06■□□□□ 0.16
GREM1O60565 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.06■□□□□ 0.16
GREM1O60565 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GREM1O60565 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
GREM1O60565 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.06■□□□□ 0.16
GREM1O60565 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GREM1O60565 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GREM1O60565 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.05■□□□□ 0.16
GREM1O60565 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.05■□□□□ 0.16
GREM1O60565 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.05■□□□□ 0.16
GREM1O60565 BCRP2-202ENST00000447763 634 ntBASIC16.05■□□□□ 0.16
GREM1O60565 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.05■□□□□ 0.16
GREM1O60565 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 BCRP6-201ENST00000510112 632 ntBASIC16.05■□□□□ 0.16
GREM1O60565 BCRP7-201ENST00000511549 544 ntBASIC16.05■□□□□ 0.16
GREM1O60565 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.05■□□□□ 0.16
GREM1O60565 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.05■□□□□ 0.16
GREM1O60565 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.05■□□□□ 0.16
GREM1O60565 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 AC025181.2-201ENST00000606994 802 ntBASIC16.05■□□□□ 0.16
GREM1O60565 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.05■□□□□ 0.16
GREM1O60565 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 AC022188.1-201ENST00000620960 1664 ntBASIC16.05■□□□□ 0.16
GREM1O60565 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GREM1O60565 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GREM1O60565 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
GREM1O60565 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GREM1O60565 PDIA3P1-201ENST00000471856 1510 ntBASIC16.04■□□□□ 0.16
GREM1O60565 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.04■□□□□ 0.16
GREM1O60565 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.04■□□□□ 0.16
GREM1O60565 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GREM1O60565 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GREM1O60565 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 AC127383.1-201ENST00000444697 1800 ntBASIC16.04■□□□□ 0.16
GREM1O60565 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GREM1O60565 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms