Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL138828.2-201ENST00000615812 383 ntBASIC15.88■□□□□ 0.13
LDB2O43679 TEX28P2-201ENST00000617764 1221 ntBASIC15.88■□□□□ 0.13
LDB2O43679 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.88■□□□□ 0.13
LDB2O43679 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.88■□□□□ 0.13
LDB2O43679 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 AC126177.1-201ENST00000547829 2218 ntBASIC15.88■□□□□ 0.13
LDB2O43679 AC013268.4-201ENST00000637413 2228 ntBASIC15.88■□□□□ 0.13
LDB2O43679 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.88■□□□□ 0.13
LDB2O43679 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LDB2O43679 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LDB2O43679 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 AC127383.1-201ENST00000444697 1800 ntBASIC15.87■□□□□ 0.13
LDB2O43679 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.87■□□□□ 0.13
LDB2O43679 RFPL4AP1-201ENST00000530883 850 ntBASIC15.87■□□□□ 0.13
LDB2O43679 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.87■□□□□ 0.13
LDB2O43679 AC140878.1-201ENST00000565277 250 ntBASIC15.87■□□□□ 0.13
LDB2O43679 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.87■□□□□ 0.13
LDB2O43679 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.87■□□□□ 0.13
LDB2O43679 AL033527.5-202ENST00000641632 1098 ntBASIC15.87■□□□□ 0.13
LDB2O43679 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.87■□□□□ 0.13
LDB2O43679 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LDB2O43679 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 TMBIM7P-203ENST00000641617 1718 ntBASIC15.86■□□□□ 0.13
LDB2O43679 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LDB2O43679 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LDB2O43679 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB2O43679 AC107890.1-201ENST00000422478 521 ntBASIC15.86■□□□□ 0.13
LDB2O43679 AC092580.3-201ENST00000430932 139 ntBASIC15.86■□□□□ 0.13
LDB2O43679 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 TARDBPP1-201ENST00000442013 1203 ntBASIC15.86■□□□□ 0.13
LDB2O43679 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 CYMP-203ENST00000474680 1263 ntBASIC15.86■□□□□ 0.13
LDB2O43679 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 AC069120.2-201ENST00000524091 540 ntBASIC15.86■□□□□ 0.13
LDB2O43679 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB2O43679 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB2O43679 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.86■□□□□ 0.13
LDB2O43679 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 MIR6069-201ENST00000620069 79 ntBASIC15.86■□□□□ 0.13
LDB2O43679 AC073592.8-201ENST00000624126 511 ntBASIC15.86■□□□□ 0.13
LDB2O43679 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.86■□□□□ 0.13
LDB2O43679 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LDB2O43679 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.86■□□□□ 0.13
LDB2O43679 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms