Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP2A1O14983 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATP2A1O14983 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATP2A1O14983 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
ATP2A1O14983 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP2A1O14983 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 SNX29P1-201ENST00000548357 1007 ntBASIC18.12■□□□□ 0.49
ATP2A1O14983 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP2A1O14983 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP2A1O14983 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP2A1O14983 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 AC018665.1-201ENST00000622927 1362 ntBASIC18.12■□□□□ 0.49
ATP2A1O14983 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2A1O14983 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP2A1O14983 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP2A1O14983 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP2A1O14983 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP2A1O14983 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP2A1O14983 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP2A1O14983 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A1O14983 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 SOCS2P1-201ENST00000417727 557 ntBASIC18.11■□□□□ 0.49
ATP2A1O14983 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2A1O14983 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.11■□□□□ 0.49
ATP2A1O14983 CROCCP4-201ENST00000457096 498 ntBASIC18.11■□□□□ 0.49
ATP2A1O14983 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.11■□□□□ 0.49
ATP2A1O14983 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 AC120045.2-201ENST00000567334 178 ntBASIC18.11■□□□□ 0.49
ATP2A1O14983 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 AL049840.4-201ENST00000602422 811 ntBASIC18.11■□□□□ 0.49
ATP2A1O14983 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A1O14983 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.11■□□□□ 0.49
ATP2A1O14983 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A1O14983 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A1O14983 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATP2A1O14983 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP2A1O14983 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP2A1O14983 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms