Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 HYMAI-201ENST00000635591 3347 ntBASIC17.87■□□□□ 0.45
DDX39AO00148 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
DDX39AO00148 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.87■□□□□ 0.45
DDX39AO00148 AL607033.1-201ENST00000623900 1599 ntBASIC17.87■□□□□ 0.45
DDX39AO00148 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 DFFBP1-201ENST00000433250 979 ntBASIC17.86■□□□□ 0.45
DDX39AO00148 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC093004.1-201ENST00000508850 424 ntBASIC17.86■□□□□ 0.45
DDX39AO00148 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.86■□□□□ 0.45
DDX39AO00148 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.86■□□□□ 0.45
DDX39AO00148 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC008494.3-201ENST00000606615 944 ntBASIC17.86■□□□□ 0.45
DDX39AO00148 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 PRAL-201ENST00000624952 3286 ntBASIC17.86■□□□□ 0.45
DDX39AO00148 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.86■□□□□ 0.45
DDX39AO00148 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
DDX39AO00148 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.86■□□□□ 0.45
DDX39AO00148 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 NFIC-211ENST00000641145 8399 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.85■□□□□ 0.45
DDX39AO00148 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
DDX39AO00148 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 SLC7A15P-201ENST00000424028 1363 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 AL353779.1-201ENST00000434793 351 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 RN7SL692P-201ENST00000464677 288 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
DDX39AO00148 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.85■□□□□ 0.45
DDX39AO00148 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
DDX39AO00148 AC092337.1-201ENST00000568699 1129 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 AC140912.1-201ENST00000577171 1054 ntBASIC17.85■□□□□ 0.45
DDX39AO00148 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
DDX39AO00148 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
DDX39AO00148 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
DDX39AO00148 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
DDX39AO00148 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms