Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00473A8K010 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00473A8K010 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00473A8K010 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00473A8K010 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00473A8K010 AC127383.1-201ENST00000444697 1800 ntBASIC12.97□□□□□ -0.33
LINC00473A8K010 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00473A8K010 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00473A8K010 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00473A8K010 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00473A8K010 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 CYP4F24P-201ENST00000586049 1580 ntBASIC12.96□□□□□ -0.33
LINC00473A8K010 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LINC00473A8K010 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00473A8K010 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.96□□□□□ -0.33
LINC00473A8K010 AC079140.1-201ENST00000508039 487 ntBASIC12.96□□□□□ -0.33
LINC00473A8K010 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00473A8K010 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00473A8K010 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00473A8K010 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.34
LINC00473A8K010 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LINC00473A8K010 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.96□□□□□ -0.34
LINC00473A8K010 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00473A8K010 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC00473A8K010 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC00473A8K010 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 HLA-H-201ENST00000383620 1096 ntBASIC12.95□□□□□ -0.34
LINC00473A8K010 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 MIR940-201ENST00000401276 94 ntBASIC12.95□□□□□ -0.34
LINC00473A8K010 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00473A8K010 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC00473A8K010 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 AL450472.2-201ENST00000603663 1156 ntBASIC12.95□□□□□ -0.34
LINC00473A8K010 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00473A8K010 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 KRT8P37-201ENST00000451609 1420 ntBASIC12.95□□□□□ -0.34
LINC00473A8K010 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00473A8K010 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC00473A8K010 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms