Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CICP23-201ENST00000605013 2741 ntBASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.43□□□□□ -0.42
TRAV5A0A0B4J249 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AC018892.3-201ENST00000623986 2499 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AC245100.5-201ENST00000452108 331 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 KRT18P34-201ENST00000488218 1270 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AL589702.1-201ENST00000641229 1509 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 AC026748.1-201ENST00000624349 3251 ntBASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV5A0A0B4J249 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AC097376.2-205ENST00000610159 5334 ntBASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
TRAV5A0A0B4J249 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms