Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AC006486.2-201ENST00000624246 2199 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AL589702.1-201ENST00000641229 1509 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AC023157.3-201ENST00000619086 2088 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PMS2P7-201ENST00000506558 1336 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 FAM58CP-201ENST00000435741 640 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AC040169.1-201ENST00000565382 521 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 RARRES2P8-201ENST00000566335 367 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AL138918.1-201ENST00000568306 659 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14□□□□□ -0.17
RHBDD3Q9Y3P4 MYO15B-237ENST00000642007 4893 ntBASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 AL671277.1-201ENST00000429656 993 ntBASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 AC002347.1-201ENST00000569543 541 ntBASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RHBDD3Q9Y3P4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms