Protein–RNA interactions for Protein: Q9Y385

UBE2J1, Ubiquitin-conjugating enzyme E2 J1, humanhuman

Predicted RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2J1Q9Y385 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 PMS2P7-201ENST00000506558 1336 ntBASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2J1Q9Y385 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AP003680.1-201ENST00000598970 3660 ntBASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2J1Q9Y385 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 U82695.1-201ENST00000635752 1889 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 AC092919.2-201ENST00000623631 1645 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 AC016027.1-202ENST00000607927 1699 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 MIR648-201ENST00000385046 94 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 AC023274.1-201ENST00000418278 595 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 MCCD1P2-201ENST00000423228 335 ntBASIC13.61□□□□□ -0.23
UBE2J1Q9Y385 AC004832.2-201ENST00000426397 482 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms