Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.56■■□□□ 1.04
NINLQ9Y2I6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NINLQ9Y2I6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 DRD5P1-201ENST00000456605 1438 ntBASIC21.55■■□□□ 1.04
NINLQ9Y2I6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 AC112504.1-201ENST00000623415 1841 ntBASIC21.55■■□□□ 1.04
NINLQ9Y2I6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 AC107373.2-201ENST00000607735 490 ntBASIC21.55■■□□□ 1.04
NINLQ9Y2I6 GPR182-203ENST00000622922 591 ntBASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NINLQ9Y2I6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC005229.1-201ENST00000392885 409 ntBASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC068587.3-201ENST00000526613 355 ntBASIC21.54■■□□□ 1.04
NINLQ9Y2I6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AC005252.2-201ENST00000624630 1141 ntBASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 OR6D1P-202ENST00000641007 5290 ntBASIC21.54■■□□□ 1.04
NINLQ9Y2I6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.54■■□□□ 1.04
NINLQ9Y2I6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AC234783.1-201ENST00000441761 496 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AL603832.2-201ENST00000566195 2125 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 CLUHP6-201ENST00000580789 941 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 RN7SL190P-201ENST00000582519 257 ntBASIC21.53■■□□□ 1.04
NINLQ9Y2I6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.53■■□□□ 1.04
NINLQ9Y2I6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms