Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 RNU1-129P-201ENST00000384064 167 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 MED15P5-201ENST00000423150 992 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 U1.21-201ENST00000580816 167 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 AL031055.1-201ENST00000606362 631 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 PCGF3-213ENST00000620529 1899 ntBASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
HHLA3Q9XRX5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 MIR940-201ENST00000401276 94 ntBASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 SLC25A1P1-201ENST00000528351 927 ntBASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AC018845.2-201ENST00000568326 409 ntBASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 MIR3909-201ENST00000579518 119 ntBASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11.71□□□□□ -0.53
HHLA3Q9XRX5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
HHLA3Q9XRX5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms