Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 TUBB8P7-204ENST00000567960 1332 ntBASIC6.3□□□□□ -1.4
MACF1Q9UPN3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 OR51A9P-201ENST00000422578 911 ntBASIC6.3□□□□□ -1.4
MACF1Q9UPN3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 AC004923.3-201ENST00000527532 355 ntBASIC6.3□□□□□ -1.4
MACF1Q9UPN3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC6.3□□□□□ -1.4
MACF1Q9UPN3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MIR4472-1-201ENST00000584349 80 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AL807761.2-201ENST00000422849 729 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 NME6-208ENST00000435684 599 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC106820.3-201ENST00000561653 397 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 CLPP-205ENST00000596605 646 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PRMT1P1-201ENST00000604252 1009 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MIR7848-201ENST00000617402 101 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC092068.3-201ENST00000587894 2016 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 RNASEH2CP1-201ENST00000454281 502 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC092284.1-201ENST00000511386 1289 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 KRT8P39-201ENST00000396270 1433 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 ALMS1P1-201ENST00000428767 921 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 CDCA4P4-201ENST00000435216 680 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 VDAC1P1-201ENST00000439229 848 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 RN7SL440P-201ENST00000577855 343 ntBASIC6.29□□□□□ -1.4
MACF1Q9UPN3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MACF1Q9UPN3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms