Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 AC068137.2-201ENST00000605408 478 ntBASIC18.3■□□□□ 0.52
USP25Q9UHP3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 PKD1P5-201ENST00000532415 10291 ntBASIC18.3■□□□□ 0.52
USP25Q9UHP3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.3■□□□□ 0.52
USP25Q9UHP3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP25Q9UHP3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 PMS2P7-201ENST00000506558 1336 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 AC002056.1-201ENST00000395613 760 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 KRT18P2-201ENST00000447938 1258 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 RPL13AP23-201ENST00000480739 586 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 AC018845.2-201ENST00000568326 409 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 MIR4321-201ENST00000592276 80 ntBASIC18.29■□□□□ 0.52
USP25Q9UHP3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP25Q9UHP3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
USP25Q9UHP3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 AC007686.3-201ENST00000619017 3487 ntBASIC18.28■□□□□ 0.52
USP25Q9UHP3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP25Q9UHP3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms