Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
LRIT1Q9P2V4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 MIR1909-201ENST00000411312 80 ntBASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 AC008735.3-201ENST00000596646 500 ntBASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 AL512343.1-201ENST00000605837 169 ntBASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT1Q9P2V4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AL162726.2-201ENST00000438986 1017 ntBASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AC234783.1-201ENST00000441761 496 ntBASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SLED1-202ENST00000512051 380 ntBASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT1Q9P2V4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT1Q9P2V4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms