Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 AC018892.3-201ENST00000623986 2499 ntBASIC13.2□□□□□ -0.3
CALYQ9NYX4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.2□□□□□ -0.3
CALYQ9NYX4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CALYQ9NYX4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AP006288.1-201ENST00000446065 395 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 AC004967.1-201ENST00000453589 447 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 SNHG9-202ENST00000564014 471 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AC105021.1-202ENST00000570572 669 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AL450472.2-201ENST00000603663 1156 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 AC134684.3-201ENST00000641758 218 ntBASIC13.19□□□□□ -0.3
CALYQ9NYX4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CALYQ9NYX4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CALYQ9NYX4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.18□□□□□ -0.3
CALYQ9NYX4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CALYQ9NYX4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 EEF1DP4-201ENST00000446006 880 ntBASIC13.18□□□□□ -0.3
CALYQ9NYX4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.18□□□□□ -0.3
CALYQ9NYX4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms